microbetag.msgenre
==================

.. py:module:: microbetag.msgenre

.. autoapi-nested-parse::

   Script to build GENREs using ModelSEEDpy and DNNGIOR

   ModelSEEDpy v0.4.2 comes with a hard constraint, it needs scikit-learn 0.24.2
   which is compatible only with Python < 3.10
   Also, numpy needs to be 1.26.4

   Thus, this script needs to be performed with Python 3.9.



Functions
---------

.. autoapisummary::

   microbetag.msgenre.reconstruct
   microbetag.msgenre.gapfill
   microbetag.msgenre.main


Module Contents
---------------

.. py:function:: reconstruct(faa, outdir=None)

.. py:function:: gapfill(draft_model, outdir=None, medium=None)

   draft_model: Path to draft .xml
   medium: path to tab-separated file .tsv


.. py:function:: main()