FAPROTAX functions¶

Here is the complete list with the metabolic or other ecologically relevant functions returned by FAPROTAX:

Term

methanotrophy

arsenate_detoxification

acetoclastic_methanogenesis

arsenate_respiration

methanogenesis_by_disproportionation_of_methyl_groups

dissimilatory_arsenate_reduction

methanogenesis_using_formate

arsenite_oxidation_detoxification

methanogenesis_by_CO2_reduction_with_H2

arsenite_oxidation_energy_yielding

methanogenesis_by_reduction_of_methyl_compounds_with_H2

dissimilatory_arsenite_oxidation

hydrogenotrophic_methanogenesis

anammox

methanogenesis

nitrate_denitrification

methanol_oxidation

nitrite_denitrification

methylotrophy

nitrous_oxide_denitrification

aerobic_ammonia_oxidation

denitrification

aerobic_nitrite_oxidation

chitinolysis

nitrification

knallgas_bacteria

sulfate_respiration

dark_hydrogen_oxidation

sulfur_respiration

nitrogen_fixation

dark_sulfite_oxidation

nitrate_ammonification

sulfite_respiration

nitrite_ammonification

thiosulfate_respiration

nitrite_respiration

respiration_of_sulfur_compounds

cellulolysis

xylanolysis

plant_pathogen

dark_sulfide_oxidation

oil_bioremediation

dark_sulfur_oxidation

aromatic_hydrocarbon_degradation

dark_thiosulfate_oxidation

aromatic_compound_degradation

dark_oxidation_of_sulfur_compounds

aliphatic_non_methane_hydrocarbon_degradation

manganese_oxidation

hydrocarbon_degradation

manganese_respiration

dark_iron_oxidation

ligninolysis

iron_respiration

fermentation

nitrate_respiration

aerobic_chemoheterotrophy

nitrate_reduction

nitrogen_respiration

invertebrate_parasites

fumarate_respiration

human_pathogens_septicemia

intracellular_parasites

chlorate_reducers

chloroplasts

predatory_or_exoparasitic

human_pathogens_pneumonia

human_pathogens_nosocomia

human_pathogens_meningitis

human_pathogens_gastroenteritis

human_pathogens_diarrhea

nonphotosynthetic_cyanobacteria

human_pathogens_all

photosynthetic_cyanobacteria

fish_parasites

aerobic_anoxygenic_phototrophy

anoxygenic_photoautotrophy_H2_oxidizing

anoxygenic_photoautotrophy_S_oxidizing

anoxygenic_photoautotrophy_Fe_oxidizing

anoxygenic_photoautotrophy

human_gut

human_associated

mammal_gut

animal_parasites_or_symbionts

oxygenic_photoautotrophy

photoautotrophy

phototrophy

photoheterotrophy

plastic_degradation

chemoheterotrophy

ureolysis

reductive_acetogenesis